SMTL ID : 5cyo.1 (1 other biounit)

High resolution Septin 9 GTPase domain in complex with GDP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 14 residues within 4Å: Chain A: Q.12, S.13, G.14, L.15, G.16, K.17, S.18, T.19, K.151, D.153, V.206, G.207, R.222 Ligands: MG.2 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:Q.12, A:G.14, A:L.15, A:G.16, A:K.17, A:S.18, A:T.19, A:T.19, A:K.151, A:G.207, A:R.222, A:R.222 Water bridges: A:K.17, A:K.17, A:T.19, A:T.45, A:T.45, A:T.45, A:K.151, A:K.151 Salt bridges: A:K.17, A:D.153

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.18, T.45 Ligands: GDP.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.18, A:T.45, H2O.1, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Castro, D.K.S.V. et al., A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface. Iucrj (2020)

Release Date

2016-08-03

Peptides

Septin-9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Septin-9

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