- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: P.100, R.101, T.102
- Ligands: EDO.5
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.102, A:T.102
- Salt bridges: A:R.101
SO4.11: 3 residues within 4Å:- Chain D: P.100, R.101, T.102
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:T.102, D:T.102
- Salt bridges: D:R.101
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
PEP.3: 14 residues within 4Å:- Chain A: R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304
- Ligands: MN.1, EDO.5
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:E.145, A:A.166
- Water bridges: A:K.99, A:K.99
- Salt bridges: A:R.94, A:K.99, A:R.167, A:K.188, A:K.188, A:R.236, A:H.270, A:H.270
PEP.7: 11 residues within 4Å:- Chain B: R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:E.145, B:A.166
- Salt bridges: B:R.94, B:K.99, B:R.167, B:K.188, B:K.188, B:R.236, B:H.270, B:H.270
PEP.9: 11 residues within 4Å:- Chain C: R.94, Y.96, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270
- Ligands: MN.8
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:A.166
- Salt bridges: C:R.94, C:R.167, C:K.188, C:K.188, C:R.236, C:H.270, C:H.270
PEP.12: 12 residues within 4Å:- Chain D: R.94, Y.96, K.99, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304
- Ligands: MN.10
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:A.166
- Salt bridges: D:R.94, D:K.99, D:R.167, D:K.188, D:K.188, D:R.236, D:H.270, D:H.270
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 3 residues within 4Å:- Chain A: H.66, L.115, P.315
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:P.315
EDO.5: 7 residues within 4Å:- Chain A: C.63, K.99, P.100, T.323, D.324
- Ligands: SO4.2, PEP.3
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:P.100, A:D.324
- Water bridges: A:K.99
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heyes, L.C. et al., NmeDAH7PS E98A variant at 2.5 Angstroms resolution. To Be Published
- Release Date
- 2016-08-10
- Peptides
- Phospho-2-dehydro-3-deoxyheptonate aldolase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heyes, L.C. et al., NmeDAH7PS E98A variant at 2.5 Angstroms resolution. To Be Published
- Release Date
- 2016-08-10
- Peptides
- Phospho-2-dehydro-3-deoxyheptonate aldolase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D