SMTL ID : 5czv.1

Crystal structure of Notch3 NRR in complex with 20350 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: K.18, D.21, R.23, D.25, D.36, D.39 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.21, A:R.23, A:D.25, A:D.36, A:D.39 CA.2: 5 residues within 4Å: Chain A: L.59, N.62, R.64, D.66, D.77 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:L.59, A:R.64, A:D.66, A:D.77, A:D.77 CA.3: 6 residues within 4Å: Chain A: H.101, D.104, R.106, D.108, D.119, D.122 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.101, A:R.106, A:D.108, A:D.119, A:D.122

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: N.61, V.240, R.242 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bernasconi-Elias, P. et al., Characterization of activating mutations of NOTCH3 in T-cell acute lymphoblastic leukemia and anti-leukemic activity of NOTCH3 inhibitory antibodies. Oncogene (2016)

Release Date

2016-06-01

Peptides

Neurogenic locus notch homolog protein 3: A
Fab 20350 heavy chain: B
Fab 20350 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Neurogenic locus notch homolog protein 3

Fab 20350 heavy chain

Fab 20350 light chain

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