SMTL ID : 5d3d.2 (1 other biounit)

Crystal structure of Staphylococcal Superantigen-Like protein 3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: M.159, K.160, N.161, N.186 Ligand excluded by PLIP

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.2: 4 residues within 4Å: Chain A: F.27, M.28, G.62, P.63 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.62

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: S.18, E.20, F.70 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.18

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: T.166, E.168, Q.174, R.177 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.168, A:Q.174 Water bridges: A:T.166, A:R.177, A:R.177 GOL.5: 7 residues within 4Å: Chain A: E.20, F.21, D.68, V.69, F.70, K.124, E.131 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.20, A:E.20 Water bridges: A:D.68, A:F.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koymans, K.J. et al., Structural basis for inhibition of TLR2 by staphylococcal superantigen-like protein 3 (SSL3). Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-08-19

Peptides

Staphylococcal Superantigen-Like protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Staphylococcal Superantigen-Like protein 3

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