- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 9 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: D.140, K.142, Y.156, K.172
- Ligands: YGP.7
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.140, A:Y.156
- Salt bridges: A:K.142, A:K.172
SO4.3: 4 residues within 4Å:- Chain A: I.78, H.79, E.80, F.81
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:I.78, A:E.80, A:F.81
- Water bridges: A:H.79
- Salt bridges: A:H.79
SO4.4: 7 residues within 4Å:- Chain A: Y.56, T.182, G.184, M.186, T.187, E.217
- Ligands: SAH.1
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:T.182, A:M.186, A:T.187, A:E.217
- Water bridges: A:T.185, A:T.185
SO4.5: 1 residues within 4Å:- Chain A: R.22
3 PLIP interactions:3 interactions with chain A- Water bridges: A:R.22, A:R.22
- Salt bridges: A:R.22
SO4.6: 3 residues within 4Å:- Chain A: D.225, H.227, K.228
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:H.227, A:K.228
SO4.9: 4 residues within 4Å:- Chain B: K.72, Y.74, K.93, K.103
7 PLIP interactions:7 interactions with chain B- Water bridges: B:Y.74, B:K.103, B:K.103, B:K.103
- Salt bridges: B:K.72, B:K.93, B:K.103
SO4.10: 6 residues within 4Å:- Chain B: Y.35, Q.36, R.39, M.65, K.68, Y.69
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.35, B:Q.36
- Salt bridges: B:R.39, B:K.68
SO4.11: 7 residues within 4Å:- Chain A: Y.208
- Chain B: Y.56, G.184, T.185, M.186, T.187
- Ligands: SAH.8
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Y.56, B:G.184, B:M.186, B:T.187
- Water bridges: B:T.185, B:T.185, B:E.217, B:E.217
SO4.12: 4 residues within 4Å:- Chain B: I.78, H.79, E.80, F.81
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:E.80, B:F.81
- Water bridges: B:H.79, B:N.224
- Salt bridges: B:H.79
- 1 x YGP: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fujishiro, T. et al., Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl. (2016)
- Release Date
- 2016-07-20
- Peptides
- Uncharacterized protein MJ0489: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 9 x SO4: SULFATE ION(Non-functional Binders)
- 1 x YGP: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fujishiro, T. et al., Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl. (2016)
- Release Date
- 2016-07-20
- Peptides
- Uncharacterized protein MJ0489: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D