SMTL ID : 5d71.1

Crystal structure of MOR04302, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 6 residues within 4Å: Chain B: P.128, S.129, S.130, T.137, A.139, S.188 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.129, B:S.129, B:S.188, B:S.188

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain C: D.1, I.2, K.30, G.89, D.90 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:D.1, C:D.1, C:I.2, C:D.90 Salt bridges: C:K.30 Water bridges: A:N.34 SO4.3: 6 residues within 4Å: Chain C: E.80, V.103, G.105, Q.106, Y.138, K.164 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.105, C:Q.106, C:Y.138, C:Y.138 Salt bridges: C:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eylenstein, R. et al., Molecular basis of in vitro affinity maturation and functional evolution of a neutralizing anti-human GM-CSF antibody. Mabs (2016)

Release Date

2015-10-14

Peptides

Granulocyte-macrophage colony-stimulating factor: A
Immunglobulin G1 Fab fragment, heavy chain: B
Immunglobulin G1 Fab fragment, light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Granulocyte-macrophage colony-stimulating factor

Immunglobulin G1 Fab fragment, heavy chain

Immunglobulin G1 Fab fragment, light chain

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