SMTL ID : 5d75.1

Crystal structure of Human FKBD25 in complex with FK506

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x FK5: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN(Non-covalent)

FK5.1: 16 residues within 4Å: Chain A: Y.27, F.37, D.38, L.54, K.62, V.63, I.64, W.67, A.89, Y.90, Q.95, A.98, I.100, F.108 Ligands: JEF.2, JEF.3 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.27, A:F.37, A:L.54, A:I.64, A:W.67, A:W.67, A:Y.90, A:I.100 Hydrogen bonds: A:D.38, A:I.64

2 x JEF: O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)(Non-covalent)

JEF.2: 3 residues within 4Å: Chain A: G.61, K.62 Ligands: FK5.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.62 JEF.3: 8 residues within 4Å: Chain A: P.86, E.87, Y.90, G.91, K.92, K.93, N.103 Ligands: FK5.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.86 Hydrogen bonds: A:K.92, A:K.92, A:K.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prakash, A. et al., Crystal structure of the FK506 binding domain of human FKBP25 in complex with FK506. Protein Sci. (2016)

Release Date

2016-04-06

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase FKBP3