SMTL ID : 5d76.1 (1 other biounit)

The crystal structure of Ly7917 with the hydrolyzing product of MDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: V.71, W.79, N.98 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: W.79, V.80, S.81 Ligand excluded by PLIP

1 x 58B: L-alanyl-D-alpha-glutamine(Non-covalent)

58B.3: 11 residues within 4Å: Chain A: A.41, Q.42, V.43, G.44, S.45, A.204, I.205, N.206, R.208, A.255, W.269 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.204, A:N.206, A:W.269 Hydrogen bonds: A:A.204, A:A.204, A:N.206 Salt bridges: A:R.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, L. et al., The crystal structure of Ly7917. To Be Published

Release Date

2016-08-17

Peptides

Putative phage lysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative phage lysin

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