SMTL ID : 5d7e.1

Crystal structure of Taf14 YEATS domain in complex with H3K9ac

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ALA- GLN- THR- ALA- ARG- ALY- SER- THR: H3K9ac(Non-covalent)

ALA-GLN-THR-ALA-ARG-ALY-SER-THR.1: 16 residues within 4Å: Chain A: F.30, R.33, H.62, T.64, F.65, G.83, W.84, G.85, G.86, F.87, P.88, D.107, N.109, F.110, L.111 Ligands: MES.5 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.30, A:F.65, A:P.88, A:L.111 Hydrogen bonds: A:R.33, A:T.64, A:T.64, A:W.84, A:G.85, A:G.86, A:G.86, A:F.110, A:L.111 Salt bridges: A:D.107

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 4 residues within 4Å: Chain A: K.56, I.58, T.71, F.94 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.56 PEG.3: 2 residues within 4Å: Chain A: E.133, K.136 No protein-ligand interaction detected (PLIP) PEG.4: 2 residues within 4Å: Chain A: E.97, K.127 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.98, A:K.98, A:K.127

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.5: 2 residues within 4Å: Chain A: W.84 Ligands: ALA-GLN-THR-ALA-ARG-ALY-SER-THR.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shanle, E.K. et al., Association of Taf14 with acetylated histone H3 directs gene transcription and the DNA damage response. Genes Dev. (2015)

Release Date

2015-09-23

Peptides

Transcription initiation factor TFIID subunit 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 14