SMTL ID : 5d9g.1 (1 other biounit)

Crystal structure of TIPRL, TOR signaling pathway regulator-like, in complex with peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x LEU- TYR- PHE- GLN: oligo peptide(Non-covalent)

LEU-TYR-PHE-GLN.1: 13 residues within 4Å: Chain A: L.131, K.132, R.134, E.135, Q.136, I.137, F.140, K.161, I.162, R.163, F.170, L.172, R.190 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.137, A:F.140, A:K.161, A:K.161, A:R.163, A:F.170, A:F.170, A:L.172 Hydrogen bonds: A:L.131, A:E.135, A:I.137, A:R.163 Water bridges: A:R.174 Salt bridges: A:R.190 pi-Cation interactions: A:R.163

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: Q.70, G.71, M.72, L.73, P.97, Y.98 Ligand excluded by PLIP

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: T.122, T.123, D.124, K.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.122, A:T.123 Salt bridges: A:K.241

1 x NI: NICKEL (II) ION(Non-covalent)

NI.4: 1 residues within 4Å: Chain A: S.168 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scorsato, V. et al., Crystal structure of the human Tip41 orthologue, TIPRL, reveals a novel fold and a binding site for the PP2Ac C-terminus. Sci Rep (2016)

Release Date

2016-08-10

Peptides

TIP41-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TIP41-like protein

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