SMTL ID : 5da3.1

Crystal structure of PTK6 Kinase domain with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: D.129, R.133, Y.159, H.162, P.167, W.170 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.133, A:Y.159, A:Y.159, A:H.162 Water bridges: A:D.129 GOL.2: 6 residues within 4Å: Chain A: R.128, A.151, I.154, E.156, Y.159, Y.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.128, A:K.155

1 x 58V: (2-chloro-4-{[6-cyclopropyl-3-(1H-pyrazol-4-yl)imidazo[1,2-a]pyrazin-8-yl]amino}phenyl)(morpholin-4-yl)methanone(Non-covalent)

58V.3: 14 residues within 4Å: Chain A: R.12, L.14, A.34, K.36, L.65, T.81, E.82, L.83, M.84, A.85, G.87, S.88, L.136, D.147 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.14, A:L.65 Hydrogen bonds: A:M.84, A:M.84, A:G.87, A:D.147 Water bridges: A:K.36, A:D.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thakur, M.K. et al., Co-crystal structures of PTK6: With Dasatinib at 2.24 angstrom , with novel imidazo[1,2-a]pyrazin-8-amine derivative inhibitor at 1.70 angstrom resolution. Biochem. Biophys. Res. Commun. (2017)

Release Date

2016-08-24

Peptides

Protein-tyrosine kinase 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein-tyrosine kinase 6