SMTL ID : 5dbn.2 (1 other biounit)

Crystal structure of AtoDA complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-2-2-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: L.137, D.138 Ligand excluded by PLIP

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 7 residues within 4Å: Chain A: A.183, D.184, A.209, V.210, D.212 Chain D: H.92, R.133 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain A Hydrogen bonds: D:R.133, A:V.210 Salt bridges: D:H.92 PO4.5: 8 residues within 4Å: Chain B: H.92, R.133 Chain C: A.183, D.184, T.186, A.209, V.210, D.212 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:R.133, C:D.212 Salt bridges: B:H.92 Water bridges: C:A.209 PO4.7: 4 residues within 4Å: Chain D: G.18, D.19, I.20, D.94 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:G.18

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 8 residues within 4Å: Chain A: L.170 Chain B: T.56, T.57, A.58, H.59, L.62, V.72 Chain C: P.201 No protein-ligand interaction detected (PLIP) PEG.6: 8 residues within 4Å: Chain D: G.99, G.100, L.101, N.111, W.112, V.113, V.114, P.120 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:G.100 Water bridges: D:G.100

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain B: L.101, N.111, W.112, V.113, V.114, P.120 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arbing, M.A. et al., Crystal structure of AtoDA complex. To Be Published

Release Date

2016-08-24

Peptides

Acetate CoA-transferase subunit alpha: AC
Acetate CoA-transferase subunit beta: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
G

B
F

D
H

Acetate CoA-transferase subunit alpha

Acetate CoA-transferase subunit beta

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