SMTL ID : 5dh3.1

Crystal structure of MST2 in complex with XMU-MP-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

homo-dimer

Ligands

2 x 5BS: 4-[(5,10-dimethyl-6-oxo-6,10-dihydro-5H-pyrimido[5,4-b]thieno[3,2-e][1,4]diazepin-2-yl)amino]benzenesulfonamide(Non-covalent)

5BS.1: 15 residues within 4Å: Chain A: L.35, V.43, A.56, M.101, E.102, Y.103, C.104, G.105, G.107, D.111, G.152, N.153, L.155, D.166, K.300 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.35, A:Y.103 Hydrogen bonds: A:C.104, A:C.104, A:D.111, A:D.166, A:K.300 Water bridges: A:Y.103 5BS.3: 16 residues within 4Å: Chain B: L.35, E.37, V.43, A.56, M.101, E.102, Y.103, C.104, G.105, G.107, D.111, L.115, G.152, L.155, A.165, K.300 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:L.35, B:L.35, B:Y.103 Hydrogen bonds: B:C.104, B:C.104, B:D.111, B:K.300

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: K.130, K.134 Ligand excluded by PLIP

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain B: Y.103, C.104, G.105, N.157, T.158 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.105, B:T.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, F. et al., Pharmacological targeting of kinases MST1 and MST2 augments tissue repair and regeneration. Sci Transl Med (2016)

Release Date

2016-08-31

Peptides

Serine/threonine-protein kinase 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase 3