SMTL ID : 5diu.1

The Fk1 domain of FKBP51 in complex with the new synthetic ligand 2-(3-((R)-1-((S)-1-((S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)acetyl)piperidine-2-carboxamido)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x 5BG: {3-[(1R)-1-[({(2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)acetyl]piperidin-2-yl}carbonyl)amino]-3-(3,4-dimethoxyphenyl)propyl]phenoxy}acetic acid(Non-covalent)

5BG.1: 16 residues within 4Å: Chain A: Y.45, K.48, K.54, D.56, F.65, V.66, G.72, Q.73, V.74, I.75, W.78, Y.101, S.106, K.109, L.116, F.118 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.45, A:K.54, A:D.56, A:F.65, A:V.74, A:I.75, A:W.78, A:W.78, A:L.116, A:F.118, A:F.118 Hydrogen bonds: A:I.75, A:Y.101 Water bridges: A:R.61, A:V.66, A:K.109 pi-Cation interactions: A:K.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaali, S. et al., Rapid, Structure-Based Exploration of Pipecolic Acid Amides as Novel Selective Antagonists of the FK506-Binding Protein 51. J.Med.Chem. (2016)

Release Date

2016-03-23

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase FKBP5

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