SMTL ID : 5djo.1

Crystal structure of the CC1-FHA tandem of Kinesin-3 KIF13A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

homo-dimer

Ligands

5 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 9 residues within 4Å: Chain A: G.103, I.104, G.105, I.106, W.152, G.153, N.154, N.155, H.156 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.105, A:I.106, A:N.154, A:N.155, A:H.156 Water bridges: A:N.155, A:N.155 FMT.2: 4 residues within 4Å: Chain A: L.71, R.149, R.159 Chain B: R.149 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.159, B:R.149, B:R.149 Water bridges: A:F.158 FMT.3: 3 residues within 4Å: Chain A: R.159 Chain B: L.71, R.149 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.149, A:R.159, A:R.159 FMT.4: 3 residues within 4Å: Chain B: G.103, I.104, H.156 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:I.104 Water bridges: B:H.156 FMT.6: 5 residues within 4Å: Chain A: L.77 Chain B: V.61, G.62, D.63, P.163 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Water bridges: B:V.61, B:D.63, B:N.161 Hydrogen bonds: A:L.77

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.5: 7 residues within 4Å: Chain B: G.119, D.120, I.121, Q.143, L.144, W.145, L.162 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:W.145 Hydrogen bonds: B:I.121, B:Q.143

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.7: 3 residues within 4Å: Chain B: W.145, H.146, L.162 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, J. et al., Structural Correlation of the Neck Coil with the Coiled-coil (CC1)-Forkhead-associated (FHA) Tandem for Active Kinesin-3 KIF13A. J.Biol.Chem. (2016)

Release Date

2015-12-30

Peptides

Kinesin-like protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Kinesin-like protein