SMTL ID : 5drv.1

Crystal structure of the G3BP2 NTF2-like domain in complex with a peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

homo-dimer

Ligands

2 x LEU- THR- PHE- GLY- ASP- PHE- ASP- GLU: Non-structural protein 3(Non-covalent)

LEU-THR-PHE-GLY-ASP-PHE-ASP-GLU.1: 12 residues within 4Å: Chain A: L.13, V.14, E.17, F.18, Q.21, L.25, Y.32, R.35, F.36, N.125, K.126, F.127 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.13, A:V.14, A:E.17, A:F.18, A:F.18, A:L.25, A:R.35, A:F.36, A:F.127, A:F.127 Hydrogen bonds: A:R.35, A:N.125, A:N.125, A:K.126, A:F.127, A:F.127 LEU-THR-PHE-GLY-ASP-PHE-ASP-GLU.2: 12 residues within 4Å: Chain B: L.13, V.14, E.17, F.18, Q.21, L.25, Y.32, R.35, F.36, N.125, K.126, F.127 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:L.13, B:V.14, B:E.17, B:F.18, B:F.18, B:L.25, B:R.35, B:F.36, B:F.127, B:F.127 Hydrogen bonds: B:R.35, B:N.125, B:K.126, B:F.127, B:F.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kristensen, O., Crystal structure of the G3BP2 NTF2-like domain in complex with a canonical FGDF motif peptide. Biochem.Biophys.Res.Commun. (2015)

Release Date

2015-10-14

Peptides

Ras GTPase-activating protein-binding protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ras GTPase-activating protein-binding protein 2