SMTL ID : 5dt6.1

Crystal structure of the Drosophila GluR1A ligand binding domain complex with glutamate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x GLU: GLUTAMIC ACID(Non-covalent)

GLU.1: 12 residues within 4Å: Chain A: Y.66, A.95, M.96, T.97, R.102, L.144, G.147, S.148, T.149, Y.179, E.198, F.225 13 PLIP interactions: 12 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:Y.66, A:L.144, A:Y.179 Hydrogen bonds: A:A.95, A:T.97, A:T.97, A:S.148, A:T.149, A:T.149, A:Y.179, A:Y.179, E.1 Salt bridges: A:R.102

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: N.65, Y.66, G.67, A.68, D.78, G.79, L.144, L.145, Y.146, G.147 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.65, A:Y.66, A:G.67 Water bridges: A:N.70 GOL.3: 4 residues within 4Å: Chain A: D.107, I.231, G.232, R.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.107 Water bridges: A:D.107, A:R.236

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Novel Functional Properties of Drosophila CNS Glutamate Receptors. Neuron (2016)

Release Date

2016-09-28

Peptides

Glutamate receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamate receptor 1