SMTL ID : 5e4a.1

Human transthyretin (TTR) complexed with (2,7-Dichloro-fluoren-9-ylideneaminooxy)-acetic acid.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

homo-tetramer

Ligands

2 x 5JW: {[(2,7-dichloro-9H-fluoren-9-ylidene)amino]oxy}acetic acid(Non-covalent)

5JW.1: 15 residues within 4Å: Chain A: K.26, L.28, T.117, A.119, L.121, S.128, T.129, T.130, V.132 Chain C: K.26, L.28, T.117, A.119, V.132 Ligands: 5JW.2 14 PLIP interactions: 8 interactions with chain A, 6 interactions with chain C Hydrophobic interactions: A:K.26, A:L.28, A:A.119, C:K.26, C:L.28, C:A.119 Hydrogen bonds: A:A.119, A:L.121, A:S.128, A:T.130 Halogen bonds: A:T.117, C:T.117 Water bridges: C:S.128, C:S.128 5JW.2: 15 residues within 4Å: Chain A: K.26, L.28, T.117, A.119, V.132 Chain C: K.26, L.28, T.117, A.119, L.121, S.128, T.129, T.130, V.132 Ligands: 5JW.1 14 PLIP interactions: 6 interactions with chain A, 8 interactions with chain C Hydrophobic interactions: A:K.26, A:L.28, A:A.119, C:K.26, C:L.28, C:A.119 Water bridges: A:S.128, A:S.128 Halogen bonds: A:T.117, C:T.117 Hydrogen bonds: C:A.119, C:L.121, C:S.128, C:T.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ciccone, L. et al., Synthesis and structural analysis of halogen substituted fibril formation inhibitors of Human Transthyretin (TTR). J Enzyme Inhib Med Chem (2016)

Release Date

2016-03-23

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transthyretin