SMTL ID : 5e69.1

Glucocorticoid receptor DNA binding domain - IL8 NF-kB response element complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.29, C.32, C.46, C.49 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.29, A:C.32, A:C.46, A:C.49 ZN.2: 4 residues within 4Å: Chain A: C.65, C.71, C.81, C.84 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.65, A:C.71, A:C.81, A:C.84, H2O.2 ZN.3: 4 residues within 4Å: Chain D: C.65, C.71, C.81, C.84 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.65, D:C.71, D:C.81, D:C.84 ZN.4: 4 residues within 4Å: Chain D: C.29, C.32, C.46, C.49 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.29, D:C.32, D:C.46, D:C.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hudson, W.H. et al., Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements. Nat Commun (2018)

Release Date

2017-02-08

Peptides

Glucocorticoid receptor: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
B

Glucocorticoid receptor

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