SMTL ID : 5e6o.4 (3 other biounits)

Crystal structure of C. elegans LGG-2 bound to an AIM/LIR motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x TRP- GLU- GLU- LEU: TRP-GLU-GLU-LEU(Non-covalent)

TRP-GLU-GLU-LEU.1: 13 residues within 4Å: Chain A: D.17, I.21, Q.25, K.28, P.30, K.49, F.50, L.51, V.52, P.53, L.61, R.68, F.106 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:I.21, A:I.21, A:P.30, A:K.49, A:K.49, A:F.50, A:F.50, A:L.51, A:L.51, A:V.52, A:L.61, A:F.106 Hydrogen bonds: A:Q.25, A:K.49, A:L.51, A:L.51, A:R.68 Water bridges: A:K.28, A:R.47, A:K.49, A:L.51 Salt bridges: A:K.28, A:R.68 pi-Cation interactions: A:K.49, A:K.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, F. et al., Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy. Mol.Cell (2015)

Release Date

2016-01-06

Peptides

Protein lgg-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Protein lgg-2

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