SMTL ID : 5e6z.4 (3 other biounits)

Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC- GLC- GLC- GLC- GLC: Cycloheptakis-(1-4)-(alpha-D-glucopyranose)(Non-covalent)

GLC-GLC-GLC-GLC-GLC-GLC-GLC.1: 7 residues within 4Å: Chain A: D.389, T.392, F.393, I.395, L.396, W.512, V.515 No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: H.497, K.498, A.499, D.529, N.533, V.608 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.498, A:A.499, A:D.529 Water bridges: A:E.534, A:R.609, A:R.609 GOL.3: 5 residues within 4Å: Chain A: R.520, D.548, Y.549, R.550, H.589 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.550 Water bridges: A:H.547, A:Y.549, A:H.589

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feng, L. et al., Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins. Acta Crystallogr D Struct Biol (2016)

Release Date

2015-12-16

Peptides

1,4-alpha-glucan branching enzyme GlgB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

1,4-alpha-glucan branching enzyme GlgB

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