SMTL ID : 5e7p.1 (1 other biounit)

Crystal Structure of MSMEG_0858 (Uniprot A0QQS4), a AAA ATPase.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

monomer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 13 residues within 4Å: Chain A: P.193, V.226, G.273, V.274, G.275, K.276, A.277, T.278, M.403, L.404, V.427, A.428 Ligands: GOL.4 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.273, A:V.274, A:G.275, A:K.276, A:A.277, A:T.278, A:T.278 Water bridges: A:K.276, A:K.276, A:R.281 Salt bridges: A:K.276 ADP.2: 15 residues within 4Å: Chain A: E.476, G.488, M.490, P.527, P.528, G.529, C.530, G.531, K.532, T.533, F.534, N.630, A.690, A.691, V.694 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:E.476, A:G.488, A:G.488, A:G.529, A:C.530, A:G.531, A:G.531, A:K.532, A:T.533, A:T.533, A:F.534, A:N.630, A:N.630, A:N.630 Salt bridges: A:K.532

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.3: 15 residues within 4Å: Chain A: S.269, G.270, P.271, A.368, P.370, L.389, S.390, L.391, V.479, A.540, G.543, L.545, V.547, H.548, R.573 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.269, A:S.269, A:G.270, A:L.391, A:G.543, A:L.545, A:V.547, A:R.573

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 10 residues within 4Å: Chain A: D.230, V.231, H.235, V.274, G.275, T.278, M.279, L.400, V.427 Ligands: ADP.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.230, A:V.274 GOL.5: 7 residues within 4Å: Chain A: T.533, R.537, A.549, V.550, K.551, F.583, D.585 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.537, A:V.550, A:D.585 Water bridges: A:K.551

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Unciuleac, M.C. et al., Crystal Structure and Biochemical Characterization of a Mycobacterium smegmatis AAA-Type Nucleoside Triphosphatase Phosphohydrolase (Msm0858). J.Bacteriol. (2016)

Release Date

2016-08-24

Peptides

Cell division control protein Cdc48: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division control protein Cdc48

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