SMTL ID : 5e8b.2 (1 other biounit)

Crystal structure of the S. cerevisiae Rtf1 histone modification domain mutant R126A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

monomer

Ligands

1 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 3 residues within 4Å: Chain A: S.18, D.19, H.22 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.22 Hydrogen bonds: A:S.18 pi-Stacking: A:H.22

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: E.24, S.25 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.24 NA.3: 3 residues within 4Å: Chain A: M.42, Y.45, Q.46 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Van Oss, S.B. et al., The Histone Modification Domain of Paf1 Complex Subunit Rtf1 Directly Stimulates H2B Ubiquitylation through an Interaction with Rad6. Mol. Cell (2016)

Release Date

2016-11-09

Peptides

RNA polymerase-associated protein RTF1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RNA polymerase-associated protein RTF1

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