SMTL ID : 5e8d.1

Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain B: L.175 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain B: S.125, V.126, Y.127, K.213 Chain C: E.122 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.126, B:V.126 GOL.3: 11 residues within 4Å: Chain B: L.146, F.171, P.172, T.181, L.182, S.183 Chain C: L.159, S.161, S.175, S.176, T.177 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:L.159, C:S.161, C:T.177, B:P.172, B:S.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kado, Y. et al., Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES. J.Biol.Chem. (2016)

Release Date

2015-12-09

Peptides

Proepiregulin: A
anti-human epiregulin antibody 9E5 Fab heavy chain: B
anti-human epiregulin antibody 9E5 Fab light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Proepiregulin

anti-human epiregulin antibody 9E5 Fab heavy chain

anti-human epiregulin antibody 9E5 Fab light chain

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