SMTL ID : 5eax.1 (1 other biounit)

Crystal structure of Dna2 in complex with an ssDNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 9 residues within 4Å: Chain A: C.137, R.140, I.387, I.388, C.394, C.397, I.400, C.403, M.423 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.137, A:C.394, A:C.397, A:C.403

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 11 residues within 4Å: Chain A: G.626, L.627, N.628, Q.631, G.654, K.655, T.656, T.657, K.689, Y.828, R.829 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:N.628, A:N.628, A:Q.631, A:Q.631, A:K.655, A:T.656, A:T.657, A:T.657, A:Y.828, A:R.829 Salt bridges: A:K.689 pi-Stacking: A:Y.828, A:Y.828

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, C. et al., Dna2 nuclease-helicase structure, mechanism and regulation by Rpa. Elife (2015)

Release Date

2015-11-18

Peptides

DNA replication ATP-dependent helicase/nuclease DNA2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA replication ATP-dependent helicase/nuclease DNA2

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