SMTL ID : 5ece.3 (3 other biounits)

Tankyrase 1 with Phthalazinone 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: S.17, V.18, F.148, Y.201 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.18, A:F.148 Hydrogen bonds: A:S.17

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: H.29, R.30, D.31, Q.120, A.185, Y.186 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.29, A:R.30, A:D.31, A:D.31, A:Q.120

1 x 5N2: 2-[4-[3-[(4-oxidanylidene-3~{H}-phthalazin-1-yl)methyl]phenyl]carbonylpiperazin-1-yl]pyridine-3-carbonitrile(Non-covalent)

5N2.3: 19 residues within 4Å: Chain A: F.80, H.81, G.82, F.85, I.89, G.93, F.94, D.95, H.98, A.99, G.108, I.109, Y.110, F.111, A.112, K.117, S.118, Y.121, E.188 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.85, A:H.98, A:Y.110, A:Y.110, A:Y.110, A:A.112, A:K.117, A:Y.121, A:Y.121, A:E.188 Hydrogen bonds: A:G.82, A:G.82, A:D.95, A:Y.110 pi-Stacking: A:H.98, A:Y.121

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 4 residues within 4Å: Chain A: C.131, H.134, C.139, C.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:H.134, A:C.139, A:C.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johannes, J.W. et al., Discovery of AZ0108, an orally bioavailable phthalazinone PARP inhibitor that blocks centrosome clustering. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-11-25

Peptides

Tankyrase-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Tankyrase-1

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