SMTL ID : 5ef4.1 (1 other biounit)

2.05 A crystal structure of the Amb a 11 cysteine protease, a major ragweed pollen allergen, in its proform

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: P.111, G.112, S.113, V.242, P.243, G.244, M.337, H.338 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.112, A:S.113, A:G.244, A:M.337, A:H.338 GOL.2: 6 residues within 4Å: Chain A: Y.61, N.62, R.65, M.86, T.87, N.88 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.62, A:R.65, A:R.65, A:M.86, A:N.88 Water bridges: A:T.87, A:L.89 GOL.3: 2 residues within 4Å: Chain A: E.90, N.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.89, A:N.93 GOL.4: 3 residues within 4Å: Chain A: R.222, E.223, T.224 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.222, A:T.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Groeme, R. et al., Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen. J.Biol.Chem. (2016)

Release Date

2016-04-27

Peptides

Cysteine protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cysteine protease

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