SMTL ID : 5eg6.1

CSL-RITA complex bound to DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-mer

Ligands

19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain B: T.417, Y.418, T.419 Ligand excluded by PLIP EDO.2: 6 residues within 4Å: Chain B: L.25, K.160, A.193, T.307, D.308, K.309 Ligand excluded by PLIP EDO.3: 4 residues within 4Å: Chain B: D.200, D.202, E.203, R.212 Ligand excluded by PLIP EDO.4: 7 residues within 4Å: Chain B: R.17, P.399, V.400, T.412, S.413, L.414, T.415 Ligand excluded by PLIP EDO.5: 5 residues within 4Å: Chain B: R.17, G.18, D.19, G.51, S.52 Ligand excluded by PLIP EDO.6: 4 residues within 4Å: Chain B: K.56, E.59, Q.60, R.63 Ligand excluded by PLIP EDO.7: 3 residues within 4Å: Chain B: M.114, K.133, R.134 Ligand excluded by PLIP EDO.8: 3 residues within 4Å: Chain B: V.172, S.173, R.175 Ligand excluded by PLIP EDO.9: 6 residues within 4Å: Chain B: L.5, T.6, R.7, W.359, E.364 Ligands: EDO.17 Ligand excluded by PLIP EDO.10: 7 residues within 4Å: Chain B: V.129, F.130, L.131, Y.312, T.326, P.327, V.328 Ligand excluded by PLIP EDO.11: 5 residues within 4Å: Chain B: R.175, A.186, S.187, S.188, E.277 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain B: L.198, D.213, G.214, Y.215, H.217, Q.220 Ligand excluded by PLIP EDO.13: 8 residues within 4Å: Chain B: R.4, N.355, R.357, W.359, E.364, V.403, R.404, N.405 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain B: F.184, H.185, R.278, I.279, I.280 Chain C: W.10, P.13 Ligand excluded by PLIP EDO.15: 5 residues within 4Å: Chain B: L.89, N.90, K.94, C.97, T.98 Ligand excluded by PLIP EDO.16: 5 residues within 4Å: Chain B: G.51, S.52, W.54, K.55 Ligands: BU1.20 Ligand excluded by PLIP EDO.17: 4 residues within 4Å: Chain B: T.6, R.7, E.8 Ligands: EDO.9 Ligand excluded by PLIP EDO.18: 7 residues within 4Å: Chain B: S.33, G.35, N.36, E.37, K.38, Y.103, S.105 Ligand excluded by PLIP EDO.26: 3 residues within 4Å: Chain C: L.9, W.10, T.11 Ligand excluded by PLIP

7 x BU1: 1,4-BUTANEDIOL(Non-functional Binders)

BU1.19: 8 residues within 4Å: Chain B: G.18, Q.20, G.53, K.56, K.57, Q.60, Y.315, E.316 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:K.56, B:Y.315 Hydrogen bonds: B:Q.20, B:E.316 Water bridges: B:Q.60 BU1.20: 8 residues within 4Å: Chain B: L.49, W.54, Q.72, P.73, L.91, K.94, N.95 Ligands: EDO.16 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.49, B:W.54, B:P.73 Hydrogen bonds: B:Q.72, B:Q.72 BU1.21: 6 residues within 4Å: Chain B: I.79, Q.87, L.102, Y.103, I.104, S.105 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.79, B:Y.103 Hydrogen bonds: B:Q.87, B:Y.103, B:S.105 BU1.22: 6 residues within 4Å: Chain B: E.311, Y.312, T.313, V.328, Y.410, S.411 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:V.328 Hydrogen bonds: B:T.313, B:S.411 Water bridges: B:S.411 BU1.23: 7 residues within 4Å: Chain B: K.28, A.151, D.152, C.154, T.159, Q.256, S.306 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:K.28 Hydrogen bonds: B:T.159, B:T.159, B:S.306 Water bridges: B:K.160 BU1.24: 4 residues within 4Å: Chain B: K.3, R.4, T.6, M.318 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:R.4, B:T.6 Hydrogen bonds: B:R.4 BU1.25: 3 residues within 4Å: Chain B: L.25, M.50, V.228 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:V.228 Water bridges: B:Y.48, B:Q.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tabaja, N.H. et al., CSL-RITA complex bound to DNA. To Be Published

Release Date

2017-04-26

Peptides

Recombining binding protein suppressor of hairless: B
hRITA: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
C

C
R

Recombining binding protein suppressor of hairless

hRITA

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