SMTL ID : 5ega.1

2009 H1N1 PA endonuclease domain in complex with an N-acylhydrazone inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: H.41, D.89, E.100, I.101 Ligands: MN.2, GK0.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.41, A:D.89, A:E.100, A:I.101 MN.2: 5 residues within 4Å: Chain A: H.41, E.61, D.89 Ligands: MN.1, GK0.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.61, A:D.89, H2O.1, H2O.1

1 x GK0: 3,4,5-tris(oxidanyl)-~{N}-[(~{E})-[3,4,5-tris(oxidanyl)phenyl]methylideneamino]benzamide(Non-covalent)

GK0.3: 10 residues within 4Å: Chain A: E.26, K.34, H.41, E.61, D.89, E.100, I.101, K.115 Ligands: MN.1, MN.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.26, A:K.34, A:K.115 pi-Stacking: A:Y.24

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carcelli, M. et al., N-acylhydrazone inhibitors of influenza virus PA endonuclease with versatile metal binding modes. Sci Rep (2016)

Release Date

2016-08-31

Peptides

Polymerase acidic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polymerase acidic protein

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