SMTL ID : 5eh1.1

Crystal structure of the extracellular part of receptor 2 of human interferon gamma

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CYS: CYSTEINE(Non-covalent)

CYS.1: 3 residues within 4Å: Chain A: C.149, P.166, R.168 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.190

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: P.105, W.106, F.107, R.111, N.112 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.107 Hydrogen bonds: A:W.106, A:N.112 Water bridges: A:W.106 NAG.3: 6 residues within 4Å: Chain A: T.45, N.85, T.87, W.106, Q.108, R.111 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.106 Hydrogen bonds: A:T.45, A:N.85, A:T.87 Water bridges: A:K.43, A:T.45, A:T.45 NAG.4: 2 residues within 4Å: Chain A: N.60, T.62 4 PLIP interactions: 4 interactions with chain A Water bridges: A:N.60, A:T.62, A:T.62, A:T.62

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: Y.44, T.45, F.84, N.85 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.44, A:T.45, A:T.45, A:N.85 Water bridges: A:Q.108 GOL.6: 9 residues within 4Å: Chain A: V.59, N.60, C.61, I.64, A.66, E.68, C.69, D.70, A.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.68, A:D.70 GOL.7: 5 residues within 4Å: Chain A: W.155, K.157, G.158, G.159, Q.161 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.158, A:G.159, A:Q.161 Water bridges: A:W.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mikulecky, P. et al., Crystal structure of human interferon-gamma receptor 2 reveals the structural basis for receptor specificity. Acta Crystallogr D Struct Biol (2016)

Release Date

2016-08-17

Peptides

Interferon gamma receptor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interferon gamma receptor 2