SMTL ID : 5ehn.1

mAChE-syn TZ2PA5 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: G.345, S.347, N.350, L.353 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.345

2 x 5NZ: 6-phenyl-5-[5-[3-[2-(1,2,3,4-tetrahydroacridin-9-ylamino)ethyl]-1,2,3-triazol-4-yl]pentyl]phenanthridin-5-ium-3,8-diamine(Non-covalent)

5NZ.2: 21 residues within 4Å: Chain A: Y.72, D.74, L.76, G.82, W.86, G.120, G.121, G.122, Y.124, Y.133, E.202, W.286, L.289, S.293, F.297, Y.337, F.338, Y.341, W.439, H.447, Y.449 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:Y.72, A:D.74, A:L.76, A:W.86, A:W.86, A:W.86, A:W.286, A:W.286, A:L.289, A:Y.337, A:Y.337, A:Y.337, A:Y.337, A:F.338, A:W.439, A:Y.449 Hydrogen bonds: A:Y.72, A:Y.72 Water bridges: A:D.74, A:W.86, A:G.121, A:G.122, A:S.125 pi-Stacking: A:W.286, A:W.286, A:W.286, A:W.286, A:Y.341, A:Y.341 5NZ.4: 20 residues within 4Å: Chain B: Y.72, D.74, G.82, W.86, G.120, G.121, G.122, Y.124, Y.133, E.202, W.286, L.289, S.293, F.297, Y.337, F.338, Y.341, W.439, H.447, Y.449 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:Y.72, B:D.74, B:W.86, B:W.86, B:W.286, B:W.286, B:W.286, B:W.286, B:Y.337, B:Y.341, B:W.439, B:Y.449 Hydrogen bonds: B:Y.72, B:Y.72 pi-Stacking: B:W.86, B:W.286, B:W.286, B:Y.337, B:Y.341

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.3: 12 residues within 4Å: Chain A: A.377, L.380, H.381, Q.527, F.531, F.535 Chain B: A.377, L.380, H.381, Q.527, F.531, F.535 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.381, B:Q.527

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bourne, Y. et al., Steric and Dynamic Parameters Influencing In Situ Cycloadditions to Form Triazole Inhibitors with Crystalline Acetylcholinesterase. J.Am.Chem.Soc. (2016)

Release Date

2016-01-20

Peptides

Acetylcholinesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acetylcholinesterase

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