SMTL ID : 5ehx.1

Crystal structure of MSF-aged Torpedo californica Acetylcholinesterase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: N.413, L.491 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 2 residues within 4Å: Chain B: N.413, L.491 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: N.56, S.58, T.59 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.56, A:S.58 NAG.3: 3 residues within 4Å: Chain A: E.452, L.453, N.454 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.453 Hydrogen bonds: A:E.452, A:N.454 NAG.7: 3 residues within 4Å: Chain B: N.56, S.58, T.59 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.56, B:S.58 NAG.8: 3 residues within 4Å: Chain B: E.452, L.453, N.454 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.453 Hydrogen bonds: B:E.452, B:N.454

2 x 03S: methanesulfonic acid(Covalent)

03S.4: 8 residues within 4Å: Chain A: G.115, G.116, S.197, A.198, F.285, F.287, H.437 Ligands: AE4.5 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:E.196 03S.9: 8 residues within 4Å: Chain B: G.115, G.116, S.197, A.198, F.285, F.287, H.437 Ligands: AE4.10 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:E.196

2 x AE4: 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL(Non-covalent)

AE4.5: 12 residues within 4Å: Chain A: Y.67, W.81, G.114, G.115, Y.118, E.196, S.197, W.276, F.327, Y.331, H.437 Ligands: 03S.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.115 Water bridges: A:Y.127 AE4.10: 12 residues within 4Å: Chain B: Y.67, W.81, G.114, G.115, Y.118, E.196, S.197, W.276, F.327, Y.331, H.437 Ligands: 03S.9 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.115 Water bridges: B:D.69, B:G.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pesaresi, A. et al., Crystal structure of MSF-aged Torpedo californica Acetylcholinesterase. To Be Published

Release Date

2016-11-09

Peptides

Acetylcholinesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Acetylcholinesterase

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