SMTL ID : 5eks.1 (2 other biounits)

Structure of 3-dehydroquinate synthase from Acinetobacter baumannii in complex with NAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: N.49, T.51, V.52, L.55, Y.56, D.78, E.80, K.83, G.111, G.112, V.113, D.116, T.136, T.137, L.139, D.143, S.144, K.149, N.159, Q.176, T.179, L.180, P.181, E.184 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.139, A:D.143 Hydrogen bonds: A:N.49, A:D.78, A:E.80, A:G.112, A:V.113, A:T.136, A:T.137, A:T.137, A:K.149, A:N.159, A:K.233 Water bridges: A:D.78, A:E.80, A:E.80, A:K.83, A:G.111, A:G.111, A:Q.133, A:K.149

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.143, E.191, H.254, H.271 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.191, A:H.254, A:H.271, H2O.5, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Structure of 3-dehydroquinate synthase from Acinetobacter baumannii in complex with NAD. to be published

Release Date

2015-12-02

Peptides

3-dehydroquinate synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-dehydroquinate synthase

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