SMTL ID : 5em4.2 (1 other biounit)

Structure of CYP2B4 F244W in a ligand free conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 21 residues within 4Å: Chain A: R.98, W.121, R.125, A.298, G.299, T.302, T.303, T.306, I.363, V.367, H.369, L.392, P.428, F.429, S.430, R.434, C.436, L.437, G.438, I.441, A.442 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:A.298, A:I.363, A:V.367, A:L.392, A:F.429, A:F.429, A:L.437, A:I.441, A:A.442 Hydrogen bonds: A:S.430, A:S.430 Salt bridges: A:R.98, A:R.98, A:R.125, A:H.369, A:R.434 Metal complexes: A:C.436

2 x CM5: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE(Non-covalent)

CM5.2: 6 residues within 4Å: Chain A: L.44, M.46, D.47, G.50, F.212, V.216 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.212, A:V.216 CM5.3: 9 residues within 4Å: Chain A: S.176, F.188, V.194, F.195, L.198, L.199, F.202, I.241, W.244 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.194, A:F.195, A:L.199, A:F.202, A:F.202, A:I.241, A:I.241, A:W.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations. Biochemistry (2016)

Release Date

2016-03-23

Peptides

Cytochrome P450 2B4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cytochrome P450 2B4

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