SMTL ID : 5em6.1

EGFR kinase domain mutant "TMLR" with pyridone compound 19: 4-[(2-azanylpyrimidin-4-yl)amino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.183, P.184, I.185, K.186, W.187 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.185, A:K.186

1 x 5Q3: 4-[(2-azanylpyrimidin-4-yl)amino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide(Non-covalent)

5Q3.2: 15 residues within 4Å: Chain A: L.25, A.50, K.52, E.69, M.73, C.82, M.97, Q.98, L.99, M.100, P.101, G.103, L.151, T.161, D.162 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.25, A:L.25, A:L.25, A:A.50 Hydrogen bonds: A:K.52, A:Q.98, A:M.100, A:M.100, A:D.162 Salt bridges: A:E.69, A:E.111, A:D.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bryan, M.C. et al., Pyridones as Highly Selective, Noncovalent Inhibitors of T790M Double Mutants of EGFR. Acs Med.Chem.Lett. (2016)

Release Date

2015-12-30

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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