SMTL ID : 5eod.1

Human Plasma Coagulation FXI with peptide LP2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

1 x GLU- PHE- PRO- ASP- PHE- PRO: LP2(Non-covalent)

GLU-PHE-PRO-ASP-PHE-PRO.1: 15 residues within 4Å: Chain A: D.100, K.102, I.104, N.105, Y.106, N.107, S.108, T.131, A.133, S.139, H.142, I.145, L.147, L.162, V.165 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.133, A:L.147, A:L.162, A:V.165 Hydrogen bonds: A:N.105, A:N.105, A:N.105 Salt bridges: A:K.102, A:K.149

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.71 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.71 NAG.3: 2 residues within 4Å: Chain A: N.107, D.124 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.124 NAG.4: 3 residues within 4Å: Chain A: N.431, S.433, N.511 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.433, A:S.433, A:N.511

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wong, S.S. et al., A novel DFP tripeptide motif interacts with the coagulation factor XI apple 2 domain. Blood (2016)

Release Date

2016-04-06

Peptides

Coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XI

Related Entries With Identical Sequence