SMTL ID : 5eom.5 (9 other biounits)

Structure of full-length human MAB21L1 with bound CTP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 5 residues within 4Å: Chain A: K.10, Y.13, H.14, K.17, K.357 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.357 Hydrogen bonds: A:Y.13 Water bridges: A:K.17 Salt bridges: A:K.10, A:H.14, A:K.17, A:K.357, A:K.357, A:K.357

1 x TMO: trimethylamine oxide(Non-covalent)

TMO.2: 2 residues within 4Å: Chain A: S.147, Y.148 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.147

1 x CTP: CYTIDINE-5'-TRIPHOSPHATE(Non-covalent)

CTP.3: 12 residues within 4Å: Chain A: R.26, K.27, I.30, I.34, N.64, R.65, Y.66, L.69, V.71, K.251, S.255, K.258 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:R.65, A:Y.66, A:Y.66, A:S.255, A:N.274 Salt bridges: A:R.26, A:R.26, A:K.27, A:K.27, A:R.65, A:K.251, A:K.251, A:K.258, A:K.258 pi-Cation interactions: A:R.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Oliveira Mann, C.C. et al., Structural and biochemical characterization of the cell fate determining nucleotidyltransferase fold protein MAB21L1. Sci Rep (2016)

Release Date

2016-06-01

Peptides

Protein mab-21-like 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Protein mab-21-like 1

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