SMTL ID : 5ep2.1

Quorum-Sensing Signal Integrator LuxO - Catalytic Domain in Complex with AzaU Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

1 x AZU: 2,2-dimethylpropyl 2-[[3,5-bis(oxidanylidene)-2~{H}-1,2,4-triazin-6-yl]sulfanyl]ethanoate(Non-covalent)

AZU.1: 12 residues within 4Å: Chain A: G.2, F.3, I.4, G.36, V.39, R.177, I.184, A.187, L.188, L.191, V.220, Q.224 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.4, A:A.187, A:L.188, A:L.191 Hydrogen bonds: A:G.2, A:I.4, A:R.177, A:R.177, A:Q.224 Water bridges: A:G.36, A:G.36

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 1 residues within 4Å: Chain A: R.228 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.228 ACT.3: 4 residues within 4Å: Chain A: T.26, I.119, F.139, R.163 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.119, A:F.139 Water bridges: A:R.163 Salt bridges: A:R.163 ACT.4: 3 residues within 4Å: Chain A: S.204, K.240, L.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.204, A:L.241 Water bridges: A:E.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boyaci, H. et al., Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO. Plos Biol. (2016)

Release Date

2016-04-20

Peptides

Putative repressor protein luxO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative repressor protein luxO

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