SMTL ID : 5eqs.1

Crystal structure of a genotype 1a/3a chimeric HCV NS3/4A protease in complex with Asunaprevir

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x 2R9: N-(tert-butoxycarbonyl)-3-methyl-L-valyl-(4R)-4-[(7-chloro-4-methoxyisoquinolin-1-yl)oxy]-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-L-prolinamide(Non-covalent)

2R9.1: 24 residues within 4Å: Chain A: Q.54, T.55, F.56, V.68, Y.69, H.70, G.71, V.91, D.92, K.93, D.94, L.145, L.148, K.149, G.150, S.151, S.152, F.167, R.168, A.169, A.170, V.171, C.172, Q.181 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.56, A:F.56, A:D.94, A:L.145, A:L.145, A:L.148, A:F.167, A:A.169, A:V.171 Hydrogen bonds: A:H.70, A:G.150, A:S.151, A:S.152, A:S.152, A:R.168, A:A.170, A:A.170

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: C.110, T.111, C.112, C.158, A.160, H.162 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.110, A:C.112, A:C.158, A:H.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soumana, D.I. et al., Molecular and Dynamic Mechanism Underlying Drug Resistance in Genotype 3 Hepatitis C NS3/4A Protease. J.Am.Chem.Soc. (2016)

Release Date

2016-11-23

Peptides

NS3 protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NS3 protease