SMTL ID : 5eqt.1

crystal structure of the ATPase domain of PAN from Pyrococcus horikoshii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 17 residues within 4Å: Chain A: D.6, I.7, G.8, L.10, P.48, G.49, C.50, G.51, K.52, T.53, L.54, I.184, H.188, G.211, A.212, K.215 Ligands: ACT.2 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.8, A:G.49, A:C.50, A:C.50, A:G.51, A:K.52, A:T.53, A:T.53, A:T.53, A:L.54 Water bridges: A:K.52, A:K.52 Salt bridges: A:K.52

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: G.46, P.47, P.48, K.52, D.105, N.152 Ligands: ADP.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.48 Water bridges: A:K.52 Salt bridges: A:K.52

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: H.188, K.215 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.188, A:K.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colombo, M. et al., crystal structure of the ATPase domain of PAN from Pyrococcus horikoshii. To Be Published

Release Date

2016-11-23

Peptides

Proteasome-activating nucleotidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proteasome-activating nucleotidase