SMTL ID : 5erc.1

X-ray crystal structure of BRPF1 PZP domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.20, C.23, C.44, C.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.20, A:C.23, A:C.44, A:C.47 ZN.2: 4 residues within 4Å: Chain A: C.3, C.6, H.28, C.31 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.3, A:C.6, A:H.28, A:C.31 ZN.3: 5 residues within 4Å: Chain A: C.57, C.60, H.77, C.80, T.139 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.57, A:C.60, A:H.77, A:C.80 ZN.4: 4 residues within 4Å: Chain A: C.113, C.116, H.137, C.140 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.113, A:C.116, A:H.137, A:C.140 ZN.5: 4 residues within 4Å: Chain A: C.127, C.132, C.171, H.174 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.127, A:C.132, A:C.171, A:H.174

1 x CA: CALCIUM ION(Non-covalent)

CA.6: 1 residues within 4Å: Chain A: G.73 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:G.73, H2O.4, H2O.5, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klein, B.J. et al., Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation. Nucleic Acids Res. (2016)

Release Date

2015-12-30

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin