SMTL ID : 5es3.1 (1 other biounit)

Co-crystal structure of LDH liganded with oxamate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-tetramer

Ligands

4 x OXM: OXAMIC ACID(Non-covalent)

OXM.1: 7 residues within 4Å: Chain A: N.137, L.164, R.168, H.192, A.237, T.247, I.251 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.137, A:T.247, A:T.247, A:T.247 Water bridges: A:A.237 Salt bridges: A:R.168, A:H.192 OXM.2: 6 residues within 4Å: Chain B: N.137, L.164, R.168, H.192, A.237, T.247 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.137, B:T.247, B:T.247 Water bridges: B:T.247 Salt bridges: B:R.168 OXM.3: 6 residues within 4Å: Chain C: N.137, L.164, R.168, H.192, A.237, T.247 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.137, C:T.247, C:T.247 Salt bridges: C:R.168, C:H.192 OXM.4: 5 residues within 4Å: Chain D: N.137, R.168, H.192, A.237, T.247 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:N.137, D:T.247, D:T.247 Salt bridges: D:R.168, D:H.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nowicki, M.W. et al., A Streamlined, Automated Protocol for the Production of Milligram Quantities of Untagged Recombinant Rat Lactate Dehydrogenase A Using AKTAxpressTM. Plos One (2015)

Release Date

2016-01-13

Peptides

L-lactate dehydrogenase A chain: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

D
B

L-lactate dehydrogenase A chain

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