SMTL ID : 5ewu.1

Crystal structure of the Arabidopsis thaliana C-terminal Chlh at 1.25A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

homo-dimer

Ligands

2 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.1: 6 residues within 4Å: Chain A: W.40, G.41, T.42, S.94, V.96, H.230 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.40, A:W.40, A:H.230 Hydrogen bonds: A:G.41, A:T.42, A:S.94, A:S.94 pi-Stacking: A:H.230 BEZ.4: 6 residues within 4Å: Chain B: W.40, G.41, T.42, S.94, V.96, H.230 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:W.40, B:W.40, B:V.96, B:H.230 Hydrogen bonds: B:G.41, B:T.42, B:T.42, B:T.42, B:S.94 Water bridges: B:D.43

5 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: S.94, G.95, Y.157, S.158 No protein-ligand interaction detected (PLIP) MG.3: 4 residues within 4Å: Chain A: D.43, N.44, T.47, S.51 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.47, A:S.51 MG.5: 4 residues within 4Å: Chain B: S.94, G.95, Y.157, S.158 No protein-ligand interaction detected (PLIP) MG.6: 4 residues within 4Å: Chain B: D.43, N.44, T.47, S.51 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:S.51 MG.7: 4 residues within 4Å: Chain B: R.22, R.265, T.266, E.269 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Z. et al., Crystal structure of the Arabidopsis thaliana C-terminal Chlh at 1.25A. To Be Published

Release Date

2016-12-07

Peptides

Magnesium-chelatase subunit ChlH, chloroplastic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Magnesium-chelatase subunit ChlH, chloroplastic