SMTL ID : 5eys.1

Crystal structure of murine neuroglobin mutant F106W at ambient pressure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: L.36, L.39, F.40, Y.42, H.62, K.65, V.66, V.69, I.70, Y.86, L.90, K.93, H.94, V.97, V.99, W.104, V.107 26 PLIP interactions: 26 interactions with chain A, Hydrophobic interactions: A:L.36, A:L.39, A:F.40, A:F.40, A:Y.42, A:K.65, A:K.65, A:V.66, A:V.69, A:V.69, A:V.69, A:I.70, A:L.90, A:V.97, A:V.99, A:V.107, A:V.107 Hydrogen bonds: A:Y.42, A:Y.42 Water bridges: A:K.65, A:K.65 Salt bridges: A:H.62, A:K.65 pi-Cation interactions: A:H.94 Metal complexes: A:H.62, A:H.94

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: S.17, P.18, L.19, E.20 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.19, A:E.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colloc'h, N. et al., Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography. Sci Rep (2017)

Release Date

2016-10-19

Peptides

Neuroglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neuroglobin