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SMTL ID : 5f06.1
Crystal structure of glutathione transferase F7 from Populus trichocarpa
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
homo-dimer
Ligands
2 x
GSH
:
GLUTATHIONE
(Non-covalent)
GSH.1:
17 residues within 4Å:
Chain A:
S.10
,
T.11
,
C.12
,
R.15
,
L.34
,
H.39
,
K.40
,
Q.52
,
I.53
,
P.54
,
E.65
,
S.66
,
R.67
,
R.124
Chain B:
H.105
,
R.106
Ligands:
SO4.2
24
PLIP interactions
:
22 interactions with chain A
,
2 interactions with chain B
Hydrophobic interactions:
A:Q.52
Hydrogen bonds:
A:R.15
,
A:Q.52
,
A:I.53
,
A:I.53
,
A:E.65
,
A:S.66
,
A:S.66
Water bridges:
A:R.15
,
A:K.40
,
A:I.53
,
A:E.65
,
A:E.65
,
A:R.67
,
A:R.67
,
A:R.67
,
A:R.124
,
A:R.124
,
B:R.106
,
B:R.106
Salt bridges:
A:H.39
,
A:K.40
,
A:R.67
,
A:R.124
GSH.3:
15 residues within 4Å:
Chain A:
H.105
,
R.106
Chain B:
S.10
,
T.11
,
C.12
,
R.15
,
L.34
,
H.39
,
K.40
,
Q.52
,
I.53
,
P.54
,
E.65
,
S.66
,
R.67
17
PLIP interactions
:
16 interactions with chain B
,
1 interactions with chain A
Hydrophobic interactions:
B:Q.52
Hydrogen bonds:
B:Q.52
,
B:I.53
,
B:I.53
,
B:E.65
,
B:S.66
,
B:S.66
Water bridges:
B:K.40
,
B:E.65
,
B:R.67
,
B:R.67
,
B:R.67
,
B:R.67
,
A:R.106
Salt bridges:
B:H.39
,
B:K.40
,
B:R.67
1 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.2:
8 residues within 4Å:
Chain A:
S.10
,
T.11
,
V.115
,
M.119
,
V.120
,
Y.172
,
Y.175
Ligands:
GSH.1
3
PLIP interactions
:
3 interactions with chain A
Hydrogen bonds:
A:T.11
,
A:T.11
,
A:Y.172
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Pegeot, H. et al., Structural plasticity among glutathione transferase Phi members: natural combination of catalytic residues confers dual biochemical activities. FEBS J. (2017)
Release Date
2016-12-07
Peptides
Glutathione S-transferase family protein:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
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Secondary Structure
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2° Structure
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Glutathione S-transferase family protein
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