- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 4 residues within 4Å:- Chain A: K.46, D.70, E.137
- Ligands: APC.1
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.70, H2O.1
MG.4: 5 residues within 4Å:- Chain B: K.46, K.54, D.70, E.137
- Ligands: APC.3
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.70, H2O.1, H2O.1
MG.6: 4 residues within 4Å:- Chain C: K.54, D.70, E.137
- Ligands: APC.5
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:D.70
MG.8: 3 residues within 4Å:- Chain D: K.54, D.70
- Ligands: APC.7
2 PLIP interactions:1 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:D.70, H2O.2
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Steinchen, W. et al., Catalytic mechanism and allosteric regulation of an oligomeric (p)ppGpp synthetase by an alarmone. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-12-16
- Peptides
- GTP pyrophosphokinase YjbM: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
YC
ZD
W
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Steinchen, W. et al., Catalytic mechanism and allosteric regulation of an oligomeric (p)ppGpp synthetase by an alarmone. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-12-16
- Peptides
- GTP pyrophosphokinase YjbM: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
YC
ZD
W