SMTL ID : 5f3o.1

Crystal structure of EhRNaseIII229 from Entamoeba histolytica complexed with Mn2+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.68, W.176, K.180 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:W.176 Water bridges: A:R.61, A:K.180 Salt bridges: A:K.68, A:K.180 SO4.4: 4 residues within 4Å: Chain B: R.61, K.68, W.176, K.180 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.61, B:K.68, B:K.180

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 5 residues within 4Å: Chain B: E.51, D.55, D.116, E.119 Ligands: MN.3 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.51, B:E.119 MN.3: 3 residues within 4Å: Chain B: E.51, D.55 Ligands: MN.2 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.51, B:D.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, X. et al., Structural and functional study of a noncanonical Dicer protein in Entamoeba histolytica. To Be Published

Release Date

2016-12-28

Peptides

Putative uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative uncharacterized protein

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