SMTL ID : 5f8p.1

A Novel Inhibitor of the Obesity-Related Protein FTO

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.86, E.299, T.302, G.303 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.302 Salt bridges: A:R.86

1 x FIJ: 4-chloranyl-6-[(2~{S})-6-chloranyl-2,4,4-trimethyl-7-oxidanyl-3~{H}-chromen-2-yl]benzene-1,3-diol(Non-covalent)

FIJ.2: 12 residues within 4Å: Chain A: V.57, I.59, L.64, T.66, P.67, Y.82, L.83, S.203, W.204, H.205, H.206, E.208 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.83, A:H.205 Water bridges: A:R.70, A:S.203, A:H.206, A:H.206 pi-Stacking: A:H.205

1 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.3: 12 residues within 4Å: Chain A: R.70, Y.82, N.179, H.205, V.218, Y.269, V.283, R.290, S.292, T.294, R.296 Ligands: FE2.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.283, A:T.294 Hydrogen bonds: A:Y.269, A:S.292, A:R.296 Salt bridges: A:R.70, A:R.290

1 x FE2: FE (II) ION(Non-covalent)

FE2.4: 4 residues within 4Å: Chain A: H.205, D.207, H.281 Ligands: AKG.3 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.207, A:H.281, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chai, J. et al., Crystal structure of FTO-CHTB. To Be Published

Release Date

2016-12-14

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO