- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 3 x NA: SODIUM ION(Non-functional Binders)
- 9 x MLI: MALONATE ION(Non-functional Binders)
MLI.2: 3 residues within 4Å:- Chain A: R.538, R.541, L.658
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.538
- Water bridges: A:R.541, A:L.658
- Salt bridges: A:R.541
MLI.3: 4 residues within 4Å:- Chain A: R.207, L.210, K.228, I.231
5 PLIP interactions:5 interactions with chain A- Water bridges: A:K.228, A:K.228, A:E.232
- Salt bridges: A:R.207, A:K.228
MLI.4: 5 residues within 4Å:- Chain A: I.56, N.60, K.71, R.74, Y.75
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:I.56
- Water bridges: A:R.74
- Salt bridges: A:K.71, A:R.74, A:R.74
MLI.5: 7 residues within 4Å:- Chain A: R.17, G.18, S.19, H.20, R.259, Y.330, E.331
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:G.18, A:S.19, A:H.20
- Water bridges: A:S.19, A:R.259, A:D.334
- Salt bridges: A:H.20, A:H.20, A:R.259
MLI.6: 5 residues within 4Å:- Chain A: H.488, D.504, L.505, S.506, A.604
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:L.505
- Water bridges: A:S.506, A:N.607, A:K.611, A:K.611, A:K.611
- Salt bridges: A:H.488, A:H.488, A:K.611
MLI.9: 3 residues within 4Å:- Chain B: R.538, R.541, L.658
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.538
- Water bridges: B:R.541, B:R.541, B:L.658
- Salt bridges: B:R.541
MLI.10: 4 residues within 4Å:- Chain B: V.192, K.196, R.374, R.466
13 PLIP interactions:13 interactions with chain B- Water bridges: B:D.191, B:D.191, B:D.191, B:R.374, B:R.374, B:R.374, B:R.374, B:R.466, B:R.466
- Salt bridges: B:K.196, B:R.374, B:R.466, B:R.466
MLI.11: 5 residues within 4Å:- Chain B: H.488, D.504, L.505, S.506, A.604
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.504, B:L.505, B:S.506
- Salt bridges: B:H.488
MLI.12: 4 residues within 4Å:- Chain B: S.19, H.20, M.21, G.22
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:M.21, B:G.22
- Water bridges: B:S.19, B:S.19
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bodea, S. et al., Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase. Cell Chem Biol (2016)
- Release Date
- 2016-09-28
- Peptides
- Choline trimethylamine-lyase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 3 x NA: SODIUM ION(Non-functional Binders)
- 9 x MLI: MALONATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bodea, S. et al., Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase. Cell Chem Biol (2016)
- Release Date
- 2016-09-28
- Peptides
- Choline trimethylamine-lyase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B