SMTL ID : 5fcr.3 (3 other biounits)

MOUSE COMPLEMENT FACTOR D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

monomer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 8 residues within 4Å: Chain A: H.79, E.88, D.89, N.168, S.219, Y.220, M.222, W.223 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:E.88, A:N.168, A:S.219, A:M.222, A:W.223 Water bridges: A:E.88 Salt bridges: A:H.79, A:D.89, A:D.89

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.137, P.139, D.140, V.141, H.143 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.140, A:V.141, A:V.141 Salt bridges: A:R.137, A:H.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maibaum, J. et al., Small-molecule factor D inhibitors targeting the alternative complement pathway. Nat.Chem.Biol. (2016)

Release Date

2016-10-26

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Complement factor D

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